| Instructor: | Karen Oegema & Terry Hwa; e-mail: , |
| Time: | Friday 4 – 6pm |
| Location: | offered synchronously via zoom [meeting id: 985 3044 9444]; authentication requires zoom login with ucsd domain name. |
| Course URL: | this page; https://matisse.ucsd.edu/courses/s21-qphysiology |
| Prerequisite: | interest in quantitative biology; consent of instructor |
Course activity:
| Date | class activity | assignment | |
| W1 | Fri, Apr 2 |
Intro to microbiome by Rachel Dutton [recording] |
read ms #1: bacterial-fungal interaction, Pierce et al, Nat Microb. (2021). |
| W2 | Fri, Apr 9 |
Discussion of ms #1 [recording] | |
| W3 | Fri, Apr 16 |
Intro to heart development by Debbie Yelon [recording] |
read ms #2: tissue movement in the embryonic heart, Boselli et al, Development (2017). |
| W4 | Fri, Apr 26 |
Discussion of ms#2 [recording] | |
| W5 | Fri, Apr 30 |
Dimensionality sensing and 3D migration by Stephanie Fraley [recording] |
preview of the subject: Scott et al, BioRxiv (2020). |
| W6 | Fri, May 7 |
continued discussion with Stephanie [recording] | Franklin et al, Nature Comm (2020). |
| W7 | Fri, May 14 |
Effect of domestication on gut microbiota by Aspen Reese [recording] | read ms #4: Reese et al, eLife (2021). |
| W8 | Fri, May 21 |
continue discussion with Aspen [recording] |
|
| W9 | Fri, May 28 |
prepare for group project (no meeting) |
|
| W10 | Fri, Jun 4 |
present group project (30 min per team including Q/A) |